I've been trying to find where I may have discussed this in the past but had no luck so I thought I'd start a new post with a "fix" for Canon Pixma CIS kits.
The problem I've been seeing has been bugging me now for over a year and was made significantly more difficult to nail down because of the sheer number of variables involved in a CIS kit in this sort of printer. For instance the size of the exit port and the poor air seal between cartridge and port create one set of problems, while the chips, differences in printer design and of course the fact that it's a bubblejet instead of a Piezo inkjet print-head design... Well, it all added up to one painful experience.
The symptoms experienced are those of printouts being banded with each pass somewhat faced and a distinct "gradient fill" effect that leaves the start of a printhead run being bold, and then fading more and more as it reaches the other side of the paper.
In the end I tried virtually every tactic I could think of and assumed, incorrectly that the problem was one of ink starvation, when in fact the exact opposite was true.. Turned out that the problem was one of ink overpressure, ie: the ink reservoirs I was using were too high in relation to the print-head thus forcing too much ink into the print-head and, at a guess, degrading the bubblejet process.
The solution is so simple I wanted to scream but basically you need to either raise the printer slightly (in my case around 2cm) or lower the ink reservoirs in relation to the printer. This corrects the imbalance of pressure and you will find that printouts appear in full colour without the banding/gradient effect.
Just to rub salt into the wound though someone pointed out recently that another CIS manufacturer already knew about this from back in the iP4000/iP3000 days... as per this link:
http://www.9to6.co.uk/phpbb2/viewtopic.php?t=77
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Printers: (Canon) MP500/830, MX700, iP4000/4200/4300/4500/5200, iX4000(A3) (Epson) C84/86, D88, CX6600, R285/800/1900 (HP) K550, K850, K5400, L7680